Browse of TCMCG006C63694 protein

CDS

Accession Number	TCMCG006C63694
gbkey	CDS
Protein Id	XP_013714703.1
Location	complement(join(37436474..37437314,37437401..37437559,37437645..37437806,37437912..37438042,37438132..37438237,37438331..37438430,37438506..37438631,37438790..37438993,37439100..37439187,37439294..37439342,37439436..37439531,37439720..37439803,37439961..37440054,37440165..37440289,37440486..37440561,37440645..37440800,37440894..37440900,37440996..37441033,37441120..37441199,37441278..37441349,37441436..37441527,37441651..37441725,37441988..37442124,37442196..37442281,37442350..37442441,37442515..37442850))
Gene	LOC106418524
GeneID	106418524
Organism	Brassica napus

Protein

Length	1203aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013859249.2
Definition	DNA ligase 4-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	L
Description	DNA ligase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	R00381        [VIEW IN KEGG]
KEGG_rclass	RC00005        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K10777        [VIEW IN KEGG]
EC	6.5.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko03450        [VIEW IN KEGG] map03450        [VIEW IN KEGG]
GOs	GO:0000726        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0003909        [VIEW IN EMBL-EBI] GO:0003910        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005576        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006266        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006289        [VIEW IN EMBL-EBI] GO:0006297        [VIEW IN EMBL-EBI] GO:0006302        [VIEW IN EMBL-EBI] GO:0006303        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009314        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010165        [VIEW IN EMBL-EBI] GO:0010212        [VIEW IN EMBL-EBI] GO:0016874        [VIEW IN EMBL-EBI] GO:0016886        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0032807        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048046        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051103        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0140097        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACGGAGGAGATCAAATTAAGCGTACTAGTGTCTCTGTTCAACTGGATTCAGAAGAGCAAAACCTCATCCCAGAAACGCTCCAAGTTCCGCAAGTTCCTCGACACCTACTGCAAACCCTCCGATTACTTCGCCGCCGTCCGTCTCATCATCCCGTCGCTCGACCGAGAGCGAGGCAGCTACGGTCTCAAGGAGTCTGTGCTCGCCACGTGTCTCATCGACGCCCTCGGAATCTCTCGCGATGCTCCCGACGCGGTTCGCCTTCTCAATTGGCGCAAAGGAGGAACCGCTAAGGCTGGAGCCAACGCCGGAAACTTCTCTTTGATTGCTGCTGAGGTACTGCAACGTAGGCAAGGGATGGCGTCGGGTGGGTTGAGTGTTAAGGAGTTGAATGATTTGCTTGATCGTTTGGCTTCGAGTGAGAACAGAGGGGAGAAGACTTCTGTTCTTTCTACGCTGATTCAGAAGACGAATGCACAGGAGATGAAGTGGGTCATTAGGATCATTCTTAAAGATTTGAAGCTGGGGATGAGCGAGAGGAGCATATTTCAGGAGTTCCATCCAGATGCTGAGGACTTGTTTAATGTCACTTGTGACTTGAAACTAGTCTGTGAAAAGCTCAGGGATCGCCACCAACGTCACAAGCGCCAGGATATAGAAGTTGGAAAAGCTGTACGACCCCAGTTAGCTATGCGTATCAGTGACGTGAATGCTGCTTGGAAGAAGCTCCACGGGAAAGATGTAGTTGCTGAGTGCAAATTTGATGGGGATCGCATTCAGATACACAAAAATGGGACTGAGATACATTACTTCTCTAGGAACTTCCTTGACCATTCTGAATATGCACATGCCATGTCGGATCTTATCGTACAAAATATAATGGCTGACAGGTGTATCCTTGATGGTGAAATGTTGGTTTGGGATACATCTCTTAATCGGTTTGCTGAATTTGGTTCGAATCAGGAAATAGTCAAAGCAGCAAGGGAGGGTCTCGACAGCCATAGACAGTTATGTTATGTTGCCTTTGATGTTCTTTATGTTGGCGATACTAGTGTCATCCACCAGAGTTTAACAGAACGGCACGGACTCCTGAGGAAAGTGGTGAAGCCGTTAAAAGGCCGGCTTGAAGTTTTAGTGCCTGAAGGTGGTCTCAATGTTCATCGCCCTTCAGGGGAACCAAGTTGGTCTATTGTGGTTCATTCTGCAGCTGATGTTGAGCGGTTTTTCAAAGAAACAGTTGAAAATAGGGATGAAGGAGTTGTGCTTAAAGACCTGGGATCGAAATGGGAACCTGGAGATCGCAGTGGCAAGTGGTTGAAGTTGAAGCCTGAATATGTCCGGGCTGGTTCTGATCTAGATGTTCTTATAATAGGAGGATACTATGGCTCTGGCCGTCACGGAGGAGAGGTAGCACAGTTTCTCGTTGGGTTGGCTGACCGGGCAGAGACAAATGTGTATCCCAGGCGATTTATGTCGTTTTGTAGAGTTGGCACAGGACTTTCTGATGAAGAGCTTAACACTGTTGTAAGCAAACTGAAGCCTTATTTCAGAAAAAATGAACACCCAAAGAAGGCCCCACCAAGCTTTTATCAGGTCACAAATCACTCAAAAGAGAGACCTGATGTTTGGATTGAAAGCCCGGAAAAATCAATAATACTCTCCATCACTAGTGACATCAGGACAATAAGGTCTGAGGTTTTTGTCGCACCTTACAGCCTGAGGTTTCCTCGTATTGATAAAGTAAGATACGACAAACCTTGGCATGAATGTCTCGATGTGCAAGCTTTTGTGGAATTGGTGAACTCAAGTAACGGCACCACACAGAAACAGAAGGAATCCGAAAGCATGCAGGACAATCCGAAAGTCATTAAATCGTCCAAGAGAGGAGGAGAGAAAAAGAATGCGTCACTTGTCCCATCTCAGTTTATTCAAACTGATGTATCGGATATCAAGGGCAAGACCTCAATCTTCTCCAATATGATATTTTATTTTGTAAACCTGCCTCGGTCCCATTCTCTTGATACATTCCACAAAATGGTGGTTGAGAATGGAGGGAAGTTCTCGATGAACTTAAACAATTCAGTGACTCATTGCATTGCAGCGGAAAGCAGTGGAATAAAGTATCAGGCAGCAAAACGTCAAAGAGATGTCATCCACTTTTCATGGGTCTTAGATTGTTGTTCACGGAATATTCTGCTTCCTTTGCAGCCAAAGTACTTCCTCCATCTCACTGATGCTTCAAGGACCAAATTACAGGATGAAATTGACGAGTTTTCCGATTCTTATTTCTTTGATTTAGACCTTGAAGGTCTCAAACAGGTCTTGAGCAATGCCAAGCAATCGGAAGACTCAAAATCCATTGAATACTACAAGAAAAAGCTATGTCCGGAGAAAAGATGGTCCTGCTTCATCGGTTGCTGCATTTACTTTCACCTCTATTGTGAAACATTGAGTATTGAAGAGGAAGCTCTGTTGGGAATCATGGCTAAGAGATTAGCGCTTGAAGTCTTAATGGGTGGTGGTAAAGTTAGCCATAATCTTTCTCATGCCTCGCACCTTGTAGTCCTTTCTACAGCAGAAGAGACTTTGGATTTTACTTCAGTTTCAAAAAGTTTCAGCGAAAAGGAGAAACGTCTTTTGCTGAAGAGAAGGCTACATGTTGTTAACTCGAACTGGTTAGAGGACAGTTTGCAAAGAGAGCAAAAACTAAGCGAGGATGTGTACACTCTGAGGCCTAAGAGTATGGAAGAGTCGGATACTGAAGAATCAGATAAATCTGAACATGATACAACGGAAGTAGCTTCCGGTGTTAGTGCTCAAACCGAAGAGCCAGCTTCCTCGAAAATGGCAGTTACGAGTTCAAGAGGACGGTCGAGTACTCGAGCTGGTAATAAAAGGGGAAGGTCTTCTACAAACTCAGTGAAACGAGTACAGAGACGCAGAGGGAAACAGCCTTCTAAGATAGGCGGAAGTGAAACAGAGGAGAGTGATACGGCTTCGGAAGAGAAGGCTTCAACAAGACTCAGTGATGATATAGCAGAAGAGACTGGTGATACTCAAAGAAACTCTAGGAGAGGAAGATCTGCAAAGAGAGGAAAGTCTCGTGTGGCACAACCCCAAAGAGTACAGAGATCAAGAAGAGGCAACAAGCCTTTGAAGATAGGAGGAGATGAGTCTGAGGAAAATGATGATTTTGATGACAAGAAAAATGATTCCGCGGAGGAGGAAAACAAGGAAGAAACAGGAGAGCCTGACAAAGCAAAGCAAAGAGATAACACAGTAACAGTTGAAGAGGCCTCCTCAAAAGATTCTAGAAATGCAAAGACCGAGATAGATAGGGAAGAGAAGATACAAATCCATGAGGATCCATTACAAGCAATGTTGATGAACATGATCCCAAGCCTCAGTCTGAGAAACACAAGCCGAACTACGGGCGACGCTAGTACGGCTAATGTTTGTGGTGAGAGTGAGTCTTCAGAGAGAAGAAAACTTGGCGCCGAGACTGATAATACGTGTGTGATGAACGCAGAGGCAGGTGAAGTTCCTCCTCCTGTGAAGAAAAAGAAAGTTAGCTACCGCGATGTTGCAGGAGAACTGCTCAAAGACTGGTGA

Protein:   MTEEIKLSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFAAVRLIIPSLDRERGSYGLKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGMASGGLSVKELNDLLDRLASSENRGEKTSVLSTLIQKTNAQEMKWVIRIILKDLKLGMSERSIFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRISDVNAAWKKLHGKDVVAECKFDGDRIQIHKNGTEIHYFSRNFLDHSEYAHAMSDLIVQNIMADRCILDGEMLVWDTSLNRFAEFGSNQEIVKAAREGLDSHRQLCYVAFDVLYVGDTSVIHQSLTERHGLLRKVVKPLKGRLEVLVPEGGLNVHRPSGEPSWSIVVHSAADVERFFKETVENRDEGVVLKDLGSKWEPGDRSGKWLKLKPEYVRAGSDLDVLIIGGYYGSGRHGGEVAQFLVGLADRAETNVYPRRFMSFCRVGTGLSDEELNTVVSKLKPYFRKNEHPKKAPPSFYQVTNHSKERPDVWIESPEKSIILSITSDIRTIRSEVFVAPYSLRFPRIDKVRYDKPWHECLDVQAFVELVNSSNGTTQKQKESESMQDNPKVIKSSKRGGEKKNASLVPSQFIQTDVSDIKGKTSIFSNMIFYFVNLPRSHSLDTFHKMVVENGGKFSMNLNNSVTHCIAAESSGIKYQAAKRQRDVIHFSWVLDCCSRNILLPLQPKYFLHLTDASRTKLQDEIDEFSDSYFFDLDLEGLKQVLSNAKQSEDSKSIEYYKKKLCPEKRWSCFIGCCIYFHLYCETLSIEEEALLGIMAKRLALEVLMGGGKVSHNLSHASHLVVLSTAEETLDFTSVSKSFSEKEKRLLLKRRLHVVNSNWLEDSLQREQKLSEDVYTLRPKSMEESDTEESDKSEHDTTEVASGVSAQTEEPASSKMAVTSSRGRSSTRAGNKRGRSSTNSVKRVQRRRGKQPSKIGGSETEESDTASEEKASTRLSDDIAEETGDTQRNSRRGRSAKRGKSRVAQPQRVQRSRRGNKPLKIGGDESEENDDFDDKKNDSAEEENKEETGEPDKAKQRDNTVTVEEASSKDSRNAKTEIDREEKIQIHEDPLQAMLMNMIPSLSLRNTSRTTGDASTANVCGESESSERRKLGAETDNTCVMNAEAGEVPPPVKKKKVSYRDVAGELLKDW